Julia C. Geue

Conservation geneticist with a keen interest in landscape genomics and local adaptation in the face of global change.

I am passionate about biodiversity and dedicated to its conservation. I'm mainly focussing on genetic diversity, a rather “neglected” but nevertheless important factor in nature conservation. I particularly explore how genetic diversity shapes species’ resilience to environmental challenges, which can provide critical insights for biodiversity conservation. Combining genomics and conservation modeling is extremely important in order to take informed conservation decisions in our constantly changing world.

Recently, I have become increasingly involved in the science-policy interface, working on bridging the gap between cutting-edge genomic research and real-world conservation strategies and policy.

I'm currently a Postdoctoral Researcher at Freiburg University with Prof. Gernot Segelbacher within the Biodiversa+ funded project "GINAMO".

Research and Interests

My main interest lies in conserving our beautiful mother nature in all of its facets, including genes, species and ecosystems. My research interests and projects range from local adaptation and comparative and landscape genomics to conservation genomics with a more applied conservation focus and their implementation into policy.

Genomics for biodiversity conservation

As an active member in the IUCN ‘Conservation Genetics Specialist Group’(CGSG), I am engaged in the promotion of the use of genetics and genomics in conservation management and decision making. We are trying to establish guidelines how to best implement genetics in practical conservation as well as enlarging and connecting the conservation genetics community all around the world.

Recently, we have been developing a framework proposing a way to include Subpopulations and Evolutionarily Significant Units (ESUs) into IUCN species assessments (RedList, Green Status of Species). Here is the preprint and the accessible websurvey of this framework

Feel free to contact me if you have questions about CGSG and our work.

Landscape genomics

Landscape genomics aims to understand the spatial distribution of genomic variation on the landscape level and in an environmental context. It integrates population genomics, landscape ecology and spatial statistical methods and is nowadays used for a variety of research questions, ranging from conservation efforts, captive breeding approaches, local adaptation or even investigating the genomic offset in regards to changing environmental conditions.

Throughout my scientific career I developed expertise in different landscape genetic/genomic mehtods (among others: GDM, LFMM, Sambada and RDA).

Biodiversity in Eastern Europe (Romania, Bulgaria)

I'm involved in a collaborative conservation project in Romania and Bulgaria (Eastern Europe). In this project we work on different taxa ranging from bird, insect, amphibian to different plant species. With genetic and genomic methods, we investigate how local environmental conditions have shaped the present genetic diversity. Additionally, we provide to support local NGO's in designing and managing protected areas (part of NATURA2000).

Bumble bees – from species distributions to local adaptation

I worked on two bumble bee species in Eastern Europe (Bombus terrestris and Bombus lucorum). These closely related species are very similar in their morphology and life-history, but their ranges only partly overlap, raising the question how they are ecologically divergent. I used species distribution modeling (SDM) and machine learning approaches to disentangle their broad habitat preferences. With the help of landscape genomic methods I could show a strong influence of the environment on regions of the genome in both species, and evaluated how potential local adaptation could contribute to differences in their distributions.

Spatial conservation prioritization

Biodiversity is very complex and therefore difficult to comprehensively characterize at all levels of organization (ecosystems, species and genes). In applied conservation prioritization, resources (monetary, personal, time) are often limited, and hence a smart and efficient way of taking quick and informative decisions is essential. One way to tackle these limitations is by using so called "biodiversity surrogates" - measures of biodiversity that hopefully represent other levels of biodiversity as well. I apply this concept using systematic conservation prioritization tools.

An important step will be to include genetic data in prioritization and surrogacy analyses.

Methodology for genetic monitoring

In collaboration with with the"EcoGenomics" Canada project, I have been developing a pipeline for microhaplotype genotyping of the coding region of genes. This pipeline was developed based on fecal DNA samples of Caribou and comprises a standardized microhaplotype profiling pipeline and the necessary steps for quality control and sequencing error evaluation of microhaplotypes. It has a broader applicability to any microhaplotype profiling done for genetic monitoring of any wild species.

Publications

Peer Reviewed (most recent ones)

most updated list on google scholar

5) J.C. Geue, P. Liu, S. Keobouasone, P. Wilson, M. Manseau (2025).MhGeneS: An analytical pipeline to allow for robust microhaplotype genotyping. Molecular Ecology Resources; DOI:10.1111/1755-0998.14027

4) S.Hoban, I. Paz-Vinas, R.E. Shaw, L. Castillo-Reina, J.M. da Silva, J. A. DeWoody, R. Ekblom, A. Fedorca, B.R. Forester, W. C. Funk, J.C. Geue, M. Heuertz, P.M. Hollingsworth, A.C. Hughes, M.E. Hunter, C. Hvilsom, F. Ishihama, R. Jordan, B. Kalamujic Stroil, F. Kershaw, C.K. Khoury, V. Köppä, L. Laikre, A..J. MacDonald, A. Mastretta-Yanes, M.H. Meek, J. Mergeay, K.L. Milette, D. O'Brien, V.J. Rincon-Parra, M. A. Rodriguez-Morales, M.C. Schuman, G. Segelbacher, P. Sunnucks, R. S. Taylor, H. Thurfjell, C. Vernesi, C.E. Grueber (2024) DNA-based studies and genetic indicator assessments are complementary approaches to conserving evolutionary potential. Conservation Genetics; DOI: 10.1007/s10592-024-01632-8.

3) H.Hinneberg, T. Bamann, J.C. Geue, K. Foerster, A. Kupfer, H. A. Thomassen (2022). Truly invasive or simply non-native? Insights from an artificial crested newt hybrid zone. Conservation Science and Practice; DOI:10.1111/csp2.12752

2) J.C. Geue, P.J. Rotter, C. Gross, Z. Benkő, I. Kovács, C. Fântână, J. Veres-Szászka,C. Domșa, E. Baltag, S.J. Daróczi, G.M. Bóné, V.D. Popescu, H.A. Thomassen (2022). Limited reciprocal surrogacy of bird and habitat diversity and inconsistencies in their representation in Romanian protected areas. PLOS ONE; DOI:10.1371/journal.pone.0251950

1) M.Glück, J.C. Geue, H.A. Thomassen (2022). Environmental differences explain subtle yet detectable genetic structure in a widespread pollinator. BMC Ecology; DOI: 10.1186/s12862-022-01963-5

Outreach

1) J.C. Geue and H.A. Thomassen (2021). Biodiversität: Mehr als nur Artenvielfalt. IDM-Themenhefts Info Europa; PDF(in german)

CV

Here you can download my Curriculum Vitae (updated April 2025).

Get in touch

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Feel free to get in touch regarding questions,collaborations or anything else!